From 9e3f714c6138957efcd5e9a62218563179b88fef Mon Sep 17 00:00:00 2001 From: Colin Powell Date: Thu, 20 Feb 2025 23:07:56 -0500 Subject: [PATCH] [books] Add papers as a data model --- poetry.lock | 1028 +++++++++-------- pyproject.toml | 1 + .../0025_remove_author_amazon_id_and_more.py | 136 +++ .../0026_alter_paper_semantic_title.py | 18 + ...7_remove_paper_num_citations_paper_tldr.py | 22 + vrobbler/apps/books/models.py | 111 +- vrobbler/apps/books/sources/google.py | 45 +- vrobbler/apps/books/sources/semantic.py | 73 ++ vrobbler/apps/scrobbles/admin.py | 2 + ...crobble_paper_alter_scrobble_media_type.py | 52 + vrobbler/apps/scrobbles/models.py | 4 +- 11 files changed, 944 insertions(+), 548 deletions(-) create mode 100644 vrobbler/apps/books/migrations/0025_remove_author_amazon_id_and_more.py create mode 100644 vrobbler/apps/books/migrations/0026_alter_paper_semantic_title.py create mode 100644 vrobbler/apps/books/migrations/0027_remove_paper_num_citations_paper_tldr.py create mode 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[package.dependencies] @@ -3873,13 +3885,13 @@ files = [ [[package]] name = "tzlocal" -version = "5.2" +version = "5.3" description = "tzinfo object for the local timezone" optional = false -python-versions = ">=3.8" +python-versions = ">=3.9" files = [ - {file = "tzlocal-5.2-py3-none-any.whl", hash = "sha256:49816ef2fe65ea8ac19d19aa7a1ae0551c834303d5014c6d5a62e4cbda8047b8"}, - {file = "tzlocal-5.2.tar.gz", hash = "sha256:8d399205578f1a9342816409cc1e46a93ebd5755e39ea2d85334bea911bf0e6e"}, + {file = "tzlocal-5.3-py3-none-any.whl", hash = "sha256:3814135a1bb29763c6e4f08fd6e41dbb435c7a60bfbb03270211bcc537187d8c"}, + {file = "tzlocal-5.3.tar.gz", hash = "sha256:2fafbfc07e9d8b49ade18f898d6bcd37ae88ce3ad6486842a2e4f03af68323d2"}, ] [package.dependencies] @@ -4183,4 +4195,4 @@ type = ["pytest-mypy"] [metadata] lock-version = "2.0" python-versions = ">=3.9,<4.0" -content-hash = "1b3b34d6e5e5db0f5192c5d2f3054cf2b747f2833a4304167d55c6e1c8e0de00" +content-hash = "0e73490cffc4cdd1f6f1ef31fa443ec2bbbdaa92311821bf89ca8845a6e50dbb" diff --git a/pyproject.toml b/pyproject.toml index 84dc43c..5eae520 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -12,6 +12,7 @@ python-dateutil = "^2.8.2" python-dotenv = "^0.20.0" python-json-logger = "^2.0.2" colorlog = "^6.6.0" +httpx = "<=0.27.2" djangorestframework = "^3.13.1" Markdown = "^3.3.6" django-filter = "^21.1" diff --git a/vrobbler/apps/books/migrations/0025_remove_author_amazon_id_and_more.py b/vrobbler/apps/books/migrations/0025_remove_author_amazon_id_and_more.py new file mode 100644 index 0000000..d3681f2 --- /dev/null +++ b/vrobbler/apps/books/migrations/0025_remove_author_amazon_id_and_more.py @@ -0,0 +1,136 @@ +# Generated by Django 4.2.19 on 2025-02-18 05:11 + +from django.db import migrations, models +import django_extensions.db.fields +import taggit.managers +import uuid + + +class Migration(migrations.Migration): + + dependencies = [ + ("scrobbles", "0067_scrobble_food_alter_scrobble_media_type"), + ("books", "0024_book_publisher"), + ] + + operations = [ + migrations.RemoveField( + model_name="author", + name="amazon_id", + ), + migrations.RemoveField( + model_name="author", + name="librarything_id", + ), + migrations.RemoveField( + model_name="author", + name="locg_slug", + ), + migrations.AddField( + model_name="author", + name="semantic_id", + field=models.CharField(blank=True, max_length=50, null=True), + ), + migrations.CreateModel( + name="Paper", + fields=[ + ( + "id", + models.BigAutoField( + auto_created=True, + primary_key=True, + serialize=False, + verbose_name="ID", + ), + ), + ( + "created", + django_extensions.db.fields.CreationDateTimeField( + auto_now_add=True, verbose_name="created" + ), + ), + ( + "modified", + django_extensions.db.fields.ModificationDateTimeField( + auto_now=True, verbose_name="modified" + ), + ), + ( + "uuid", + models.UUIDField( + blank=True, + default=uuid.uuid4, + editable=False, + null=True, + ), + ), + ("run_time_seconds", models.IntegerField(default=900)), + ( + "run_time_ticks", + models.PositiveBigIntegerField(blank=True, null=True), + ), + ("title", models.CharField(max_length=255)), + ("semantic_title", models.CharField(max_length=255)), + ( + "koreader_data_by_hash", + models.JSONField(blank=True, null=True), + ), + ( + "semantic_id", + models.CharField(blank=True, max_length=50, null=True), + ), + ( + "arxiv_id", + models.CharField(blank=True, max_length=50, null=True), + ), + ( + "corpus_id", + models.CharField(blank=True, max_length=50, null=True), + ), + ( + "doi_id", + models.CharField(blank=True, max_length=50, null=True), + ), + ("pages", models.IntegerField(blank=True, null=True)), + ( + "language", + models.CharField(blank=True, max_length=4, null=True), + ), + ( + "first_publish_year", + models.IntegerField(blank=True, null=True), + ), + ("publish_date", models.DateField(blank=True, null=True)), + ( + "journal", + models.CharField(blank=True, max_length=255, null=True), + ), + ( + "journal_volume", + models.CharField(blank=True, max_length=50, null=True), + ), + ("abstract", models.TextField(blank=True, null=True)), + ("num_citations", models.IntegerField(blank=True, null=True)), + ( + "openaccess_pdf_url", + models.CharField(blank=True, max_length=255, null=True), + ), + ( + "authors", + models.ManyToManyField(blank=True, to="books.author"), + ), + ( + "genre", + taggit.managers.TaggableManager( + help_text="A comma-separated list of tags.", + through="scrobbles.ObjectWithGenres", + to="scrobbles.Genre", + verbose_name="Tags", + ), + ), + ], + options={ + "abstract": False, + }, + ), + ] diff --git a/vrobbler/apps/books/migrations/0026_alter_paper_semantic_title.py b/vrobbler/apps/books/migrations/0026_alter_paper_semantic_title.py new file mode 100644 index 0000000..aad8054 --- /dev/null +++ b/vrobbler/apps/books/migrations/0026_alter_paper_semantic_title.py @@ -0,0 +1,18 @@ +# Generated by Django 4.2.19 on 2025-02-18 05:28 + +from django.db import migrations, models + + +class Migration(migrations.Migration): + + dependencies = [ + ("books", "0025_remove_author_amazon_id_and_more"), + ] + + operations = [ + migrations.AlterField( + model_name="paper", + name="semantic_title", + field=models.CharField(blank=True, max_length=255, null=True), + ), + ] diff --git a/vrobbler/apps/books/migrations/0027_remove_paper_num_citations_paper_tldr.py b/vrobbler/apps/books/migrations/0027_remove_paper_num_citations_paper_tldr.py new file mode 100644 index 0000000..f39a336 --- /dev/null +++ b/vrobbler/apps/books/migrations/0027_remove_paper_num_citations_paper_tldr.py @@ -0,0 +1,22 @@ +# Generated by Django 4.2.19 on 2025-02-18 05:33 + +from django.db import migrations, models + + +class Migration(migrations.Migration): + + dependencies = [ + ("books", "0026_alter_paper_semantic_title"), + ] + + operations = [ + migrations.RemoveField( + model_name="paper", + name="num_citations", + ), + migrations.AddField( + model_name="paper", + name="tldr", + field=models.CharField(blank=True, max_length=255, null=True), + ), + ] diff --git a/vrobbler/apps/books/models.py b/vrobbler/apps/books/models.py index 69db360..bb70f82 100644 --- a/vrobbler/apps/books/models.py +++ b/vrobbler/apps/books/models.py @@ -36,6 +36,7 @@ from vrobbler.apps.books.locg import ( lookup_comic_writer_by_locg_slug, ) from vrobbler.apps.books.sources.google import lookup_book_from_google +from vrobbler.apps.books.sources.semantic import lookup_paper_from_semantic from vrobbler.apps.scrobbles.dataclasses import BookLogData COMICVINE_API_KEY = getattr(settings, "COMICVINE_API_KEY", "") @@ -64,22 +65,27 @@ class Author(TimeStampedModel): ) bio = models.TextField(**BNULL) wikipedia_url = models.CharField(max_length=255, **BNULL) - isni = models.CharField(max_length=255, **BNULL) - locg_slug = models.CharField(max_length=255, **BNULL) wikidata_id = models.CharField(max_length=255, **BNULL) + isni = models.CharField(max_length=255, **BNULL) goodreads_id = models.CharField(max_length=255, **BNULL) - librarything_id = models.CharField(max_length=255, **BNULL) comicvine_data = models.JSONField(**BNULL) - amazon_id = models.CharField(max_length=255, **BNULL) + + semantic_id = models.CharField(max_length=50, **BNULL) def __str__(self): return f"{self.name}" - def fix_metadata(self, data_dict: dict = {}): - if not data_dict and self.openlibrary_id: - data_dict = lookup_author_from_openlibrary(self.openlibrary_id) + def enrich_from_semantic(self, overwrite=False): + ... + + def enrich_from_google_books(self, overwrite=False): + ... + + def enrich_from_openlibrary(self, overwrite=False): + data_dict = lookup_author_from_openlibrary(self.openlibrary_id) if not data_dict or not data_dict.get("name"): + logger.warning("Could not find author on openlibrary") return headshot_url = data_dict.pop("author_headshot_url", "") @@ -160,26 +166,32 @@ class Book(LongPlayScrobblableMixin): if not created and not overwrite: return book - bdict, authors, cover, genres = lookup_book_from_google( - title - ).as_dict_with_authors_cover_and_genres() + book_dict = lookup_book_from_google(title) if created or overwrite: author_list = [] + authors = book_dict.pop("authors") + cover_url = book_dict.pop("cover_url") + genres = book_dict.pop("generes") + if authors: for author_str in authors: if author_str: - author_list.append( - Author.objects.get_or_create(name=author_str)[0] + author, a_created = Author.objects.get_or_create( + name=author_str ) + author_list.append(author) + if a_created: + # TODO enrich author + ... - for k, v in bdict.items(): + for k, v in book_dict.items(): setattr(book, k, v) - book.save() + book.save() - book.save_image_from_url(cover) - book.genre.add(*genres) - book.authors.add(*author_list) + book.save_image_from_url(cover_url) + book.genre.add(*genres) + book.authors.add(*author_list) return book def save_image_from_url(self, url: str, force_update: bool = False): @@ -474,3 +486,68 @@ class Page(TimeStampedModel): seconds=self.duration_seconds ) self.save(update_fields=["end_time"]) + + +class Paper(LongPlayScrobblableMixin): + """Keeps track of Academic Papers""" + + COMPLETION_PERCENT = getattr(settings, "PAPER_COMPLETION_PERCENT", 60) + AVG_PAGE_READING_SECONDS = getattr( + settings, "AVERAGE_PAGE_READING_SECONDS", 60 + ) + + title = models.CharField(max_length=255) + semantic_title = models.CharField(max_length=255, **BNULL) + authors = models.ManyToManyField(Author, blank=True) + koreader_data_by_hash = models.JSONField(**BNULL) + arxiv_id = models.CharField(max_length=50, **BNULL) + semantic_id = models.CharField(max_length=50, **BNULL) + arxiv_id = models.CharField(max_length=50, **BNULL) + corpus_id = models.CharField(max_length=50, **BNULL) + doi_id = models.CharField(max_length=50, **BNULL) + pages = models.IntegerField(**BNULL) + language = models.CharField(max_length=4, **BNULL) + first_publish_year = models.IntegerField(**BNULL) + publish_date = models.DateField(**BNULL) + journal = models.CharField(max_length=255, **BNULL) + journal_volume = models.CharField(max_length=50, **BNULL) + abstract = models.TextField(**BNULL) + tldr = models.CharField(max_length=255, **BNULL) + openaccess_pdf_url = models.CharField(max_length=255, **BNULL) + + genre = TaggableManager(through=ObjectWithGenres) + + @classmethod + def get_from_semantic(cls, title: str, overwrite: bool = False) -> "Paper": + paper, created = cls.objects.get_or_create(title=title) + if not created and not overwrite: + return paper + + paper_dict = lookup_paper_from_semantic(title) + + if created or overwrite: + author_list = [] + author_dicts = paper_dict.pop("author_dicts") + if author_dicts: + for author_dict in author_dicts: + if author_dict.get("authorId"): + author, a_created = Author.objects.get_or_create( + semantic_id=author_dict.get("authorId") + ) + author_list.append(author) + if a_created: + author.name = author_dict.get("name") + author.save() + # TODO enrich author? + ... + + for k, v in paper_dict.items(): + setattr(paper, k, v) + paper.save() + + if author_list: + paper.authors.add(*author_list) + genres = paper_dict.pop("genres", []) + if genres: + paper.genre.add(*genres) + return paper diff --git a/vrobbler/apps/books/sources/google.py b/vrobbler/apps/books/sources/google.py index cc06ff4..d7bfc3b 100644 --- a/vrobbler/apps/books/sources/google.py +++ b/vrobbler/apps/books/sources/google.py @@ -3,7 +3,6 @@ import logging import pendulum import requests -from books.metadata import BookMetadata from django.conf import settings API_KEY = settings.GOOGLE_API_KEY @@ -14,8 +13,8 @@ GOOGLE_BOOKS_URL = ( logger = logging.getLogger(__name__) -def lookup_book_from_google(title: str) -> BookMetadata: - book_metadata = BookMetadata(title=title) +def lookup_book_from_google(title: str) -> dict: + book_dict = {"title": title} url = GOOGLE_BOOKS_URL.format(title=title, key=API_KEY) headers = {"User-Agent": "Vrobbler 0.11.12"} @@ -25,7 +24,7 @@ def lookup_book_from_google(title: str) -> BookMetadata: logger.warning( "Bad response from Google", extra={"response": response} ) - return book_metadata + return book_dict google_result = ( json.loads(response.content).get("items", [{}])[0].get("volumeInfo") @@ -39,30 +38,32 @@ def lookup_book_from_google(title: str) -> BookMetadata: isbn_13 = ident.get("identifier") if ident.get("type") == "ISBN_10": isbn_10 = ident.get("identifier") - book_metadata.title = google_result.get("title") - if google_result.get("subtitle"): - book_metadata.title = ": ".join( - [google_result.get("title"), google_result.get("subtitle")] - ) - book_metadata.authors = google_result.get("authors") - book_metadata.publisher = google_result.get("publisher") - book_metadata.first_publish_year = publish_date.year - book_metadata.pages = google_result.get("pageCount") - book_metadata.isbn_13 = isbn_13 - book_metadata.isbn_10 = isbn_10 - book_metadata.publish_date = google_result.get("publishedDate") - book_metadata.language = google_result.get("language") - book_metadata.summary = google_result.get("description") - book_metadata.genres = google_result.get("categories") - book_metadata.cover_url = ( + # TODO this may lead to issues with the first get if Google changes our title + # book_metadata.title = google_result.get("title") + # if google_result.get("subtitle"): + # book_metadata["title"] = ": ".join( + # [google_result.get("title"), google_result.get("subtitle")] + # ) + book_dict["subtitle"] = google_result.get("subtitle") + book_dict["authors"] = google_result.get("authors") + book_dict["publisher"] = google_result.get("publisher") + book_dict["first_publish_year"] = publish_date.year + book_dict["pages"] = google_result.get("pageCount") + book_dict["isbn_13"] = isbn_13 + book_dict["isbn_10"] = isbn_10 + book_dict["publish_date"] = google_result.get("publishedDate") + book_dict["language"] = google_result.get("language") + book_dict["summary"] = google_result.get("description") + book_dict["genres"] = google_result.get("categories") + book_dict["cover_url"] = ( google_result.get("imageLinks", {}) .get("thumbnail") .replace("zoom=1", "zoom=15") .replace("&edge=curl", "") ) - book_metadata.run_time_seconds = book_metadata.pages * getattr( + book_dict["run_time_seconds"] = book_dict.get("pages", 10) * getattr( settings, "AVERAGE_PAGE_READING_SECONDS", 60 ) - return book_metadata + return book_dict diff --git a/vrobbler/apps/books/sources/semantic.py b/vrobbler/apps/books/sources/semantic.py new file mode 100644 index 0000000..714fdf9 --- /dev/null +++ b/vrobbler/apps/books/sources/semantic.py @@ -0,0 +1,73 @@ +import json +import logging +from datetime import datetime + +import requests +from django.conf import settings + +PAPER_SEARCH_URL = ( + "https://api.semanticscholar.org/graph/v1/paper/search/match?query={}" +) +PAPER_DETAIL_URL = "https://api.semanticscholar.org/graph/v1/paper/{}?fields=title,authors,url,year,abstract,externalIds,citationCount,referenceCount,journal,fieldsOfStudy,publicationDate,openAccessPdf" + +logger = logging.getLogger(__name__) + + +def get_api_result(url): + headers = {"User-Agent": "Vrobbler 0.11.12"} + response = requests.get(url, headers=headers) + + if response.status_code != 200: + logger.warning( + "Bad response from Semantic", extra={"response": response} + ) + return None + + return response + + +def lookup_paper_from_semantic(title: str) -> dict: + paper_dict = {"title": title} + + response = get_api_result(PAPER_SEARCH_URL.format(title)) + if not response: + return paper_dict + + semantic_id = json.loads(response.content).get("data")[0].get("paperId") + response = get_api_result(PAPER_DETAIL_URL.format(semantic_id)) + + result = json.loads(response.content) + + page_str = result.get("journal", {}).get("pages") + if page_str: + try: + start_page = page_str.split(" - ")[0] + end_page = page_str.split(" - ")[1] + paper_dict["pages"] = int(end_page) - int(start_page) + except IndexError: + pass + + paper_dict["semantic_id"] = result.get("paperId") + paper_dict["doi_id"] = result.get("externalIds", {}).get("DOI") + paper_dict["arxiv_id"] = result.get("externalIds", {}).get("ArXiv") + paper_dict["pubmed_id"] = result.get("externalIds", {}).get("PubMed") + paper_dict["corpus_id"] = result.get("externalIds", {}).get("CorpusId") + paper_dict["semantic_title"] = result.get("title") + paper_dict["first_publish_year"] = result.get("year") + paper_dict["publish_date"] = datetime.strptime( + result.get("publicationDate", "1950-01-01"), "%Y-%m-%d" + ) + paper_dict["abstract"] = result.get("abstract") + paper_dict["tldr"] = result.get("bib", {}).get("abstract") + paper_dict["journal"] = result.get("journal", {}).get("name") + paper_dict["journal_volume"] = result.get("journal", {}).get("volume") + paper_dict["openaccess_pdf_url"] = result.get("openAccessPdf", {}).get( + "url" + ) + paper_dict["run_time_seconds"] = paper_dict.get("pages", 10) * getattr( + settings, "AVERAGE_PAGE_READING_SECONDS", 60 + ) + paper_dict["author_dicts"] = result.get("authors") + paper_dict["genres"] = result.get("fieldsOfStudy") + + return paper_dict diff --git a/vrobbler/apps/scrobbles/admin.py b/vrobbler/apps/scrobbles/admin.py index 6894a0c..57bb459 100644 --- a/vrobbler/apps/scrobbles/admin.py +++ b/vrobbler/apps/scrobbles/admin.py @@ -20,7 +20,9 @@ class ScrobbleInline(admin.TabularInline): "track", "video_game", "book", + "paper", "sport_event", + "food", "board_game", "geo_location", "task", diff --git a/vrobbler/apps/scrobbles/migrations/0068_scrobble_paper_alter_scrobble_media_type.py b/vrobbler/apps/scrobbles/migrations/0068_scrobble_paper_alter_scrobble_media_type.py new file mode 100644 index 0000000..71e87b3 --- /dev/null +++ b/vrobbler/apps/scrobbles/migrations/0068_scrobble_paper_alter_scrobble_media_type.py @@ -0,0 +1,52 @@ +# Generated by Django 4.2.19 on 2025-02-18 05:27 + +from django.db import migrations, models +import django.db.models.deletion + + +class Migration(migrations.Migration): + + dependencies = [ + ("books", "0025_remove_author_amazon_id_and_more"), + ("scrobbles", "0067_scrobble_food_alter_scrobble_media_type"), + ] + + operations = [ + migrations.AddField( + model_name="scrobble", + name="paper", + field=models.ForeignKey( + blank=True, + null=True, + on_delete=django.db.models.deletion.DO_NOTHING, + to="books.paper", + ), + ), + migrations.AlterField( + model_name="scrobble", + name="media_type", + field=models.CharField( + choices=[ + ("Video", "Video"), + ("Track", "Track"), + ("PodcastEpisode", "Podcast episode"), + ("SportEvent", "Sport event"), + ("Book", "Book"), + ("Paper", "Paper"), + ("VideoGame", "Video game"), + ("BoardGame", "Board game"), + ("GeoLocation", "GeoLocation"), + ("Trail", "Trail"), + ("Beer", "Beer"), + ("Food", "Food"), + ("Task", "Task"), + ("WebPage", "Web Page"), + ("LifeEvent", "Life event"), + ("Mood", "Mood"), + ("BrickSet", "Brick set"), + ], + default="Video", + max_length=14, + ), + ), + ] diff --git a/vrobbler/apps/scrobbles/models.py b/vrobbler/apps/scrobbles/models.py index 51f61d1..b925bd1 100644 --- a/vrobbler/apps/scrobbles/models.py +++ b/vrobbler/apps/scrobbles/models.py @@ -10,7 +10,7 @@ import pytz from beers.models import Beer from boardgames.models import BoardGame from books.koreader import process_koreader_sqlite_file -from books.models import Book +from books.models import Book, Paper from bricksets.models import BrickSet from django.conf import settings from django.contrib.auth import get_user_model @@ -502,6 +502,7 @@ class Scrobble(TimeStampedModel): PODCAST_EPISODE = "PodcastEpisode", "Podcast episode" SPORT_EVENT = "SportEvent", "Sport event" BOOK = "Book", "Book" + PAPER = "Paper", "Paper" VIDEO_GAME = "VideoGame", "Video game" BOARD_GAME = "BoardGame", "Board game" GEO_LOCATION = "GeoLocation", "GeoLocation" @@ -524,6 +525,7 @@ class Scrobble(TimeStampedModel): SportEvent, on_delete=models.DO_NOTHING, **BNULL ) book = models.ForeignKey(Book, on_delete=models.DO_NOTHING, **BNULL) + paper = models.ForeignKey(Paper, on_delete=models.DO_NOTHING, **BNULL) video_game = models.ForeignKey( VideoGame, on_delete=models.DO_NOTHING, **BNULL )